- Scientific Name
- Enterococcus raffinosus
- Common Names
- -
- Bioproject
- PRJNA948548
- Biosample
- SAMN33918490
- Accession No.
- GCA_031927165.1
- RefSeq Accession No.
- GCF_031927165.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The Second Affiliated Hospital of Zhejiang University School of Medicine, Zhejiang University
- Released Date
- 2025-12-27
- NCBI Released Date
- 2023-09-25
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_031927165.1 | GCF_031927165.1 | identical | ASM3192716v1 | Draft genome in chromosome level | 2023-09-25 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,222,438 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 101 |
| GC content | 39.5 |
| Scaffold sequence No. | 101 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 136,663 |
| Scaffold N75 (bp) | 91,312 |
| Scaffold N90 (bp) | 35,516 |
| Contig sequence No. | 104 |
| Contig L50 | 9 |
| Contig N50 (bp) | 136,663 |
| Unique components No. | 101 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 283 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4106 | 64 | 2 | 1 | 42 | 3 | 4218 |
Statistics of Genome Assembly
| Genome size (bp) | 4,222,438 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 101 |
| GC content | 39.5 |
| Scaffold sequence No. | 101 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 136,663 |
| Scaffold N75 (bp) | 91,312 |
| Scaffold N90 (bp) | 35,516 |
| Contig sequence No. | 104 |
| Contig L50 | 9 |
| Contig N50 (bp) | 136,663 |
| Unique components No. | 101 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 283 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4093 | 64 | 2 | asse1 | 57 | 3 | 4220 |