- Scientific Name
- Lentinula edodes
- Common Names
- shiitake mushroom; Agaricus edodes, Lentinus edodes
- Bioproject
- PRJNA305462
- Biosample
- SAMN04325385
- Accession No.
- GCA_004919705.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The Chinese University of Hong Kong
- Released Date
- 2025-02-23
- NCBI Released Date
- 2019-04-29
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_004919705.1 | - | - | ASM491970v1 | Draft genome in chromosome level | 2019-04-29 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 38,543,369 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 2,398 |
| GC content | 46 |
| Scaffold sequence No. | 2,398 |
| Scaffold L50 | 94 |
| Scaffold N50 (bp) | 115,993 |
| Scaffold N75 (bp) | 59,902 |
| Scaffold N90 (bp) | 18,184 |
| Contig sequence No. | 4,672 |
| Contig L50 | 402 |
| Contig N50 (bp) | 25,079 |
| Unique components No. | 2,398 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2,274 |
| Ns gap sequence region length (bp) | 2,296,968 |
| Gaps No. between scaffolds | 0 |