- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae B.C. Couch, 2002, Magnaporthe oryzae
- Bioproject
- PRJNA825294
- Biosample
- SAMN27511241
- Accession No.
- GCA_030512215.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- National Science and Technology Development Agency
- Released Date
- 2023-12-05
- NCBI Released Date
- 2023-07-26
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_030512215.1 | - | - | TGR2_hybrid_assembly | Draft genome in scaffold level | 2023-07-26 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 38,916,680 |
| Chromosomes, organellas and plasmids sequnece No. | 7 |
| Genome sequence No. | 1,771 |
| GC content | 51.5 |
| Scaffold sequence No. | 1,771 |
| Scaffold L50 | 3 |
| Scaffold N50 (bp) | 5,827,256 |
| Scaffold N75 (bp) | 4,264,142 |
| Scaffold N90 (bp) | 3,053,485 |
| Contig sequence No. | 3,234 |
| Contig L50 | 62 |
| Contig N50 (bp) | 152,159 |
| Unique components No. | 1,771 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,463 |
| Ns gap sequence region length (bp) | 146,209 |
| Gaps No. between scaffolds | 0 |