- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae B.C. Couch, 2002, Magnaporthe oryzae
- Bioproject
- PRJNA926786
- Biosample
- SAMN33013233
- Accession No.
- GCA_032881745.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Kentucky
- Released Date
- 2023-11-18
- NCBI Released Date
- 2023-09-05
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_032881745.1 | - | - | JA119_contigs_nh.fasta | Draft genome in chromosome level | 2023-09-05 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 40,329,958 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 3,686 |
| GC content | 51.5 |
| Scaffold sequence No. | 3,686 |
| Scaffold L50 | 251 |
| Scaffold N50 (bp) | 44,150 |
| Scaffold N75 (bp) | 23,077 |
| Scaffold N90 (bp) | 10,442 |
| Contig sequence No. | 6,940 |
| Contig L50 | 767 |
| Contig N50 (bp) | 15,510 |
| Unique components No. | 3,686 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3,254 |
| Ns gap sequence region length (bp) | 294,526 |
| Gaps No. between scaffolds | 0 |