- Scientific Name
- Manihot esculenta
- Common Names
- manioc, tapioca, yuca; cassava; Manihot utilissima
- Bioproject
- PRJEB65447
- Biosample
- SAMEA114306358
- Accession No.
- GCA_963409055.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- uliege
- Released Date
- 2023-11-16
- NCBI Released Date
- 2023-10-02
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_963409055.1 | - | - | TME3 | Draft genome in chromosome level | 2023-10-02 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 1,562,929,113 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 8,161 |
| GC content | 38.5 |
| Scaffold sequence No. | 8,161 |
| Scaffold L50 | 23 |
| Scaffold N50 (bp) | 22,737,009 |
| Scaffold N75 (bp) | 4,955,499 |
| Scaffold N90 (bp) | 54,675 |
| Contig sequence No. | 71,789 |
| Contig L50 | 2,451 |
| Contig N50 (bp) | 153,204 |
| Unique components No. | 8,161 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 63,628 |
| Ns gap sequence region length (bp) | 264,704,333 |
| Gaps No. between scaffolds | 0 |