- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJNA1009406
- Biosample
- SAMN37151398
- Accession No.
- GCA_031225015.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The Pirbright Institute
- Released Date
- 2024-01-05
- NCBI Released Date
- 2023-09-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_031225015.1 | - | - | TPI_Babraham_pig_v1 | Draft genome in scaffold level | 2023-09-08 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 2,447,649,174 |
| Chromosomes, organellas and plasmids sequnece No. | 21 |
| Genome sequence No. | 1,055 |
| GC content | 42 |
| Scaffold sequence No. | 1,055 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 139,229,676 |
| Scaffold N75 (bp) | 125,632,492 |
| Scaffold N90 (bp) | 70,202,452 |
| Contig sequence No. | 1,391 |
| Contig L50 | 23 |
| Contig N50 (bp) | 34,948,847 |
| Unique components No. | 1,055 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 336 |
| Ns gap sequence region length (bp) | 33,600 |
| Gaps No. between scaffolds | 0 |