- Scientific Name
- Eubacterium callanderi
- Common Names
- -
- Bioproject
- PRJEB17213
- Biosample
- SAMN04487888
- Accession No.
- GCA_900115415.1
- RefSeq Accession No.
- GCF_900115415.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DOE - JOINT GENOME INSTITUTE
- Released Date
- 2025-03-30
- NCBI Released Date
- 2016-11-02
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_900115415.1 | GCF_900115415.1 | identical | IMG-taxon 2623620475 annotated assembly | Draft genome in chromosome level | 2016-11-02 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,368,996 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 24 |
| GC content | 47 |
| Scaffold sequence No. | 24 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 388,808 |
| Scaffold N75 (bp) | 365,272 |
| Scaffold N90 (bp) | 122,801 |
| Contig sequence No. | 26 |
| Contig L50 | 5 |
| Contig N50 (bp) | 388,808 |
| Unique components No. | 24 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 2,174 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4206 | 56 | 14 | 8 | 0 | 0 | 4284 |
Statistics of Genome Assembly
| Genome size (bp) | 4,368,996 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 24 |
| GC content | 47 |
| Scaffold sequence No. | 24 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 388,808 |
| Scaffold N75 (bp) | 365,272 |
| Scaffold N90 (bp) | 122,801 |
| Contig sequence No. | 26 |
| Contig L50 | 5 |
| Contig N50 (bp) | 388,808 |
| Unique components No. | 24 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 2,174 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4161 | 56 | 14 | asse1 | 30 | 3 | 4265 |