- Scientific Name
- Salmonella enterica subsp. enterica serovar Muenchen
- Common Names
- Salmonella enterica serovar Muenchen, Salmonella muenchen
- Bioproject
- PRJNA186035
- Biosample
- SAMN04155466
- Accession No.
- GCA_001878985.1
- RefSeq Accession No.
- GCF_001878985.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Center for Food Safety and Applied Nutrition
- Released Date
- 2023-12-14
- NCBI Released Date
- 2016-11-14
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001878985.1 | GCF_001878985.1 | identical | ASM187898v1 | Complete genome | 2016-11-14 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,782,071 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 42 |
| GC content | 52 |
| Contig sequence No. | 42 |
| Contig L50 | 5 |
| Contig N50 (bp) | 411,427 |
| Unique components No. | 42 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4466 | 79 | 30 | 14 | 49 | 3 | 4641 |
Statistics of Genome Assembly
| Genome size (bp) | 4,782,071 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 42 |
| GC content | 52 |
| Contig sequence No. | 42 |
| Contig L50 | 5 |
| Contig N50 (bp) | 411,427 |
| Unique components No. | 42 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4432 | 79 | 30 | asse11 | 105 | 3 | 4660 |