- Scientific Name
- Eubacterium callanderi
- Common Names
- -
- Bioproject
- PRJEB18374
- Biosample
- SAMN04515649
- Accession No.
- GCA_900142645.1
- RefSeq Accession No.
- GCF_900142645.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DOE - JOINT GENOME INSTITUTE
- Released Date
- 2025-03-30
- NCBI Released Date
- 2016-12-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_900142645.1 | GCF_900142645.1 | identical | IMG-taxon 2642422560 annotated assembly | Draft genome in chromosome level | 2016-12-03 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,448,893 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 28 |
| GC content | 47 |
| Scaffold sequence No. | 28 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 315,970 |
| Scaffold N75 (bp) | 173,211 |
| Scaffold N90 (bp) | 126,970 |
| Contig sequence No. | 34 |
| Contig L50 | 7 |
| Contig N50 (bp) | 244,089 |
| Unique components No. | 28 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6 |
| Ns gap sequence region length (bp) | 7,697 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4206 | 54 | 12 | 8 | 0 | 0 | 4280 |
Statistics of Genome Assembly
| Genome size (bp) | 4,448,893 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 28 |
| GC content | 47 |
| Scaffold sequence No. | 28 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 315,970 |
| Scaffold N75 (bp) | 173,211 |
| Scaffold N90 (bp) | 126,970 |
| Contig sequence No. | 34 |
| Contig L50 | 7 |
| Contig N50 (bp) | 244,089 |
| Unique components No. | 28 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6 |
| Ns gap sequence region length (bp) | 7,697 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4152 | 54 | 12 | asse1 | 42 | 3 | 4264 |