- Scientific Name
- Rosa rugosa
- Common Names
- Japanese rose, Turkestan rose;
- Bioproject
- PRJEB64184
- Biosample
- SAMEA111431194
- Accession No.
- GCA_958449725.1
- RefSeq Accession No.
- GCF_958449725.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- WELLCOME SANGER INSTITUTE
- Released Date
- 2026-07-24
- NCBI Released Date
- 2023-07-18
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_958449725.1 | GCF_958449725.1 | different | drRosRugo1.1 | Draft genome in scaffold level | 2023-07-18 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 417,588,498 |
| Chromosomes, organellas and plasmids sequnece No. | 9 |
| Genome sequence No. | 79 |
| GC content | 39.5 |
| Scaffold sequence No. | 79 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 58,176,182 |
| Scaffold N75 (bp) | 56,393,972 |
| Scaffold N90 (bp) | 41,385,338 |
| Contig sequence No. | 1,093 |
| Contig L50 | 202 |
| Contig N50 (bp) | 653,714 |
| Unique components No. | 79 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,014 |
| Ns gap sequence region length (bp) | 202,800 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 417,128,682 |
| Chromosomes, organellas and plasmids sequnece No. | 7 |
| Genome sequence No. | 77 |
| GC content | 39.5 |
| Scaffold sequence No. | 77 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 58,176,182 |
| Scaffold N75 (bp) | 56,393,972 |
| Scaffold N90 (bp) | 41,385,338 |
| Contig sequence No. | 1,091 |
| Contig L50 | 202 |
| Contig N50 (bp) | 653,714 |
| Unique components No. | 77 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,014 |
| Ns gap sequence region length (bp) | 202,800 |
| Gaps No. between scaffolds | 0 |