- Scientific Name
- Salmonella enterica subsp. enterica serovar Hvittingfoss
- Common Names
- -
- Bioproject
- PRJNA203445
- Biosample
- SAMN03265085
- Accession No.
- GCA_002047475.1
- RefSeq Accession No.
- GCF_002047475.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of California at Davis
- Released Date
- 2023-11-26
- NCBI Released Date
- 2017-03-20
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002047475.1 | GCF_002047475.1 | identical | ASM204747v1 | Complete genome | 2017-03-20 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,695,779 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| Contig sequence No. | 58 |
| Contig L50 | 8 |
| Contig N50 (bp) | 233,080 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 4,695,779 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| GC content | 52.5 |
| Contig sequence No. | 58 |
| Contig L50 | 8 |
| Contig N50 (bp) | 233,080 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4319 | 76 | 18 | asse11 | 129 | 3 | 4556 |