- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae B.C. Couch, 2002, Magnaporthe oryzae
- Bioproject
- PRJEB27419
- Biosample
- SAMEA4753517
- Accession No.
- GCA_905109865.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- UNIVERSITY OF EXETER
- Released Date
- 2023-11-02
- NCBI Released Date
- 2020-11-22
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_905109865.1 | - | - | Assembly of M.oryzae isolate JUM1 genome | Draft genome in chromosome level | 2020-11-22 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 40,503,273 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 4,992 |
| Scaffold sequence No. | 4,992 |
| Scaffold L50 | 87 |
| Scaffold N50 (bp) | 127,476 |
| Scaffold N75 (bp) | 42,509 |
| Scaffold N90 (bp) | 7,991 |
| Contig sequence No. | 10,988 |
| Contig L50 | 969 |
| Contig N50 (bp) | 11,762 |
| Unique components No. | 4,992 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5,996 |
| Ns gap sequence region length (bp) | 565,796 |
| Gaps No. between scaffolds | 0 |