- Scientific Name
- Pyricularia oryzae
- Common Names
- rice blast fungus; Magnaporthe oryzae
- Bioproject
- PRJEB22035
- Biosample
- SAMEA104190813
- Accession No.
- GCA_905125175.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- UNIVERSITY OF EXETER
- Released Date
- 2023-11-16
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_905125175.1 | - | - | Assembly of M.oryzae isolate BTJP_4_1 genome | Draft genome in scaffold level | 2020-12-16 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 43,392,441 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,100 |
| Scaffold sequence No. | 1,100 |
| Scaffold L50 | 117 |
| Scaffold N50 (bp) | 109,624 |
| Scaffold N75 (bp) | 54,305 |
| Scaffold N90 (bp) | 24,741 |
| Contig sequence No. | 2,269 |
| Contig L50 | 294 |
| Contig N50 (bp) | 41,442 |
| Unique components No. | 1,100 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,169 |
| Ns gap sequence region length (bp) | 12,255 |
| Gaps No. between scaffolds | 0 |