- Scientific Name
- Camellia sinensis
- Common Names
- black tea; Thea sinensis
- Bioproject
- PRJEB71966
- Biosample
- SAMEA115129556
- Accession No.
- GCA_963931765.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Institute for Biological Data Science
- Released Date
- 2024-04-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_963931765.1 | - | - | Camellia_sinensis_Zijuan_reference_assembly | Draft genome in scaffold level | 2024-03-29 | DNA |
| GCA_963931765.2 | - | - | Camellia_sinensis_Zijuan_reference_annotation | Draft genome in scaffold level | 2024-06-22 | DNA GFF RNA Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,062,322,709 |
| Chromosomes, organellas and plasmids sequnece No. | 15 |
| Genome sequence No. | 550 |
| GC content | 38.5 |
| Scaffold sequence No. | 550 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 211,849,564 |
| Scaffold N75 (bp) | 179,622,578 |
| Scaffold N90 (bp) | 156,206,181 |
| Contig sequence No. | 740 |
| Contig L50 | 12 |
| Contig N50 (bp) | 94,856,585 |
| Unique components No. | 550 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 190 |
| Ns gap sequence region length (bp) | 19,000 |
| Gaps No. between scaffolds | 0 |