- Scientific Name
- Cervus nippon
- Common Names
- sika deer;
- Bioproject
- PRJNA1056557
- Biosample
- SAMN39104256
- Accession No.
- GCA_038088365.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- northwestern polytechnology university
- Released Date
- 2025-05-29
- NCBI Released Date
- 2024-04-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_038088365.1 | - | - | NPU_CNip_2 | Draft genome in scaffold level | 2024-04-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 3,375,477,613 |
| Chromosomes, organellas and plasmids sequnece No. | 34 |
| Genome sequence No. | 7,559 |
| GC content | 44.5 |
| Scaffold sequence No. | 7,559 |
| Scaffold L50 | 17 |
| Scaffold N50 (bp) | 67,151,499 |
| Scaffold N75 (bp) | 39,983,089 |
| Scaffold N90 (bp) | 129,063 |
| Contig sequence No. | 7,797 |
| Contig L50 | 29 |
| Contig N50 (bp) | 32,504,617 |
| Unique components No. | 7,559 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 238 |
| Ns gap sequence region length (bp) | 119,000 |
| Gaps No. between scaffolds | 0 |