- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA1050426
- Biosample
- SAMN38739532
- Accession No.
- GCA_040143505.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- East China Normal University
- Released Date
- 2025-05-26
- NCBI Released Date
- 2024-06-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_040143505.1 | - | - | ASM4014350v1 | Draft genome in scaffold level | 2024-06-12 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 811,650,996 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 14 |
| GC content | 34.5 |
| Scaffold sequence No. | 14 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 68,825,846 |
| Scaffold N75 (bp) | 65,167,186 |
| Scaffold N90 (bp) | 55,630,171 |
| Contig sequence No. | 26 |
| Contig L50 | 8 |
| Contig N50 (bp) | 50,193,672 |
| Unique components No. | 14 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 12 |
| Ns gap sequence region length (bp) | 1,200 |
| Gaps No. between scaffolds | 0 |