- Scientific Name
- Salmonella enterica subsp. diarizonae
- Common Names
- Salmonella cholerae-suis subsp. diarizonae, Salmonella choleraesuis subsp. diarizonae, Salmonella enterica IIIb, Salmonella enterica serovar IIIb, Salmonella enterica subsp. IIIb, Salmonella enterica subsp. Subsp. IIIb
- Bioproject
- PRJNA406863
- Biosample
- SAMN07633032
- Accession No.
- GCA_002794415.1
- RefSeq Accession No.
- GCF_002794415.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The First Affiliated Hospital College of Medicine Zhejiang University
- Released Date
- 2023-12-11
- NCBI Released Date
- 2017-11-21
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002794415.1 | GCF_002794415.1 | identical | ASM279441v1 | Draft genome in contig level | 2017-11-21 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 5,087,369 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 51.5 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 5,087,369 |
| Scaffold N75 (bp) | 5,087,369 |
| Scaffold N90 (bp) | 5,087,369 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4644 | 89 | 22 | 6 | 289 | 3 | 5053 |
Statistics of Genome Assembly
| Genome size (bp) | 5,087,369 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 51.5 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 5,087,369 |
| Scaffold N75 (bp) | 5,087,369 |
| Scaffold N90 (bp) | 5,087,369 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4521 | 88 | 22 | asse6 | 201 | 3 | 4841 |