- Scientific Name
- Lentinula edodes
- Common Names
- shiitake mushroom; Agaricus edodes, Lentinus edodes
- Bioproject
- PRJNA444093
- Biosample
- SAMN08778769
- Accession No.
- GCA_021015755.1
- RefSeq Accession No.
- GCF_021015755.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DOE Joint Genome Institute
- Released Date
- 2025-02-23
- NCBI Released Date
- 2021-11-30
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_021015755.1 | GCF_021015755.1 | identical | Lenedo1 | Complete genome | 2021-11-30 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 45,594,472 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 128 |
| GC content | 46 |
| Contig sequence No. | 128 |
| Contig L50 | 22 |
| Contig N50 (bp) | 692,557 |
| Unique components No. | 128 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 14078 | 311 | 0 | 0 | 3 | 0 | 14392 |
Statistics of Genome Assembly
| Genome size (bp) | 45,594,472 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 128 |
| GC content | 46 |
| Contig sequence No. | 128 |
| Contig L50 | 22 |
| Contig N50 (bp) | 692,557 |
| Unique components No. | 128 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 14078 | 311 | 0 | asse0 | 3 | 0 | 14392 |