- Scientific Name
- Citrus reticulata
- Common Names
- mandarin orange, tangerine; Citrus poonensis
- Bioproject
- PRJNA1003804
- Biosample
- SAMN45546314
- Accession No.
- GCA_046463875.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Huazhong Agricultural University
- Released Date
- 2025-08-14
- NCBI Released Date
- 2025-01-03
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_046463875.1 | - | - | ASM4646387v1 | Draft genome in scaffold level | 2025-01-03 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 349,219,376 |
| Chromosomes, organellas and plasmids sequnece No. | 9 |
| Genome sequence No. | 215 |
| GC content | 34.5 |
| Scaffold sequence No. | 215 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 33,574,700 |
| Scaffold N75 (bp) | 33,345,487 |
| Scaffold N90 (bp) | 26,908,167 |
| Contig sequence No. | 375 |
| Contig L50 | 13 |
| Contig N50 (bp) | 8,572,488 |
| Unique components No. | 215 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 160 |
| Ns gap sequence region length (bp) | 683,734 |
| Gaps No. between scaffolds | 0 |