logo
Advanced

  • Pyricularia oryzae
  • ZJG1M_oryza
    • Scientific Name
    Pyricularia oryzae
    Common Names
    rice blast fungus; Magnaporthe oryzae
    Bioproject
    PRJNA817219
    Biosample
    SAMN26750225
    Accession No.
    GCA_025135345.1
    RefSeq Accession No.
    -
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Jilin Academy of Agricultural Sciences
    Released Date
    2023-11-10
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA Protein
    RefSeq Download
    -
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_025135345.1 - - ZJG1M_oryza Draft genome in scaffold level 2022-09-12 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 37,841,042
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 1,004
    GC content 51.5
    Scaffold sequence No. 1,004
    Scaffold L50 78
    Scaffold N50 (bp) 123,987
    Scaffold N75 (bp) 50,370
    Scaffold N90 (bp) 15,005
    Contig sequence No. 1,034
    Contig L50 83
    Contig N50 (bp) 117,886
    Unique components No. 1,004
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 30
    Ns gap sequence region length (bp) 3,389
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 12330 0 0 0 0 0 12330