- Scientific Name
- Thomasclavelia ramosa
- Common Names
- Bacillus ramosus, Clostridium ramosum (Veillon and Zuber 1898) Holdeman et al. 1971 (Approved Lists 1980), Erysipelatoclostridium ramosum, Nocardia ramosa
- Bioproject
- PRJNA482748
- Biosample
- SAMN09734541
- Accession No.
- GCA_003457945.1
- RefSeq Accession No.
- GCF_003457945.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- BGI
- Released Date
- 2023-11-15
- NCBI Released Date
- 2018-09-05
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003457945.1 | GCF_003457945.1 | identical | ASM345794v1 | Draft genome in chromosome level | 2018-09-05 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,799,075 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| Scaffold sequence No. | 58 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 108,782 |
| Scaffold N75 (bp) | 68,995 |
| Scaffold N90 (bp) | 47,441 |
| Contig sequence No. | 77 |
| Contig L50 | 12 |
| Contig N50 (bp) | 94,298 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 280 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3621 | 47 | 3 | 0 | 106 | 3 | 3780 |
Statistics of Genome Assembly
| Genome size (bp) | 3,799,075 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| GC content | 31.5 |
| Scaffold sequence No. | 58 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 108,782 |
| Scaffold N75 (bp) | 68,995 |
| Scaffold N90 (bp) | 47,441 |
| Contig sequence No. | 77 |
| Contig L50 | 12 |
| Contig N50 (bp) | 94,298 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 280 |
| Gaps No. between scaffolds | 0 |