- Scientific Name
- Streptococcus mutans
- Common Names
- -
- Bioproject
- PRJNA482748
- Biosample
- SAMN09736576
- Accession No.
- GCA_003466855.1
- RefSeq Accession No.
- GCF_003466855.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- BGI
- Released Date
- 2023-12-19
- NCBI Released Date
- 2018-09-06
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003466855.1 | GCF_003466855.1 | identical | ASM346685v1 | Draft genome in chromosome level | 2018-09-06 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,020,615 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 12 |
| Scaffold sequence No. | 12 |
| Scaffold L50 | 2 |
| Scaffold N50 (bp) | 366,385 |
| Scaffold N75 (bp) | 270,120 |
| Scaffold N90 (bp) | 122,183 |
| Contig sequence No. | 14 |
| Contig L50 | 3 |
| Contig N50 (bp) | 352,813 |
| Unique components No. | 12 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 20 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1929 | 37 | 3 | 1 | 74 | 3 | 2047 |
Statistics of Genome Assembly
| Genome size (bp) | 2,020,615 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 12 |
| GC content | 36.5 |
| Scaffold sequence No. | 12 |
| Scaffold L50 | 2 |
| Scaffold N50 (bp) | 366,385 |
| Scaffold N75 (bp) | 270,120 |
| Scaffold N90 (bp) | 122,183 |
| Contig sequence No. | 14 |
| Contig L50 | 3 |
| Contig N50 (bp) | 352,813 |
| Unique components No. | 12 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 20 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1879 | 37 | 3 | asse1 | 62 | 3 | 1985 |