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  • Lentinula edodes
  • Led_CS584_1
    • Scientific Name
    Lentinula edodes
    Common Names
    shiitake mushroom; Agaricus edodes, Lentinus edodes
    Bioproject
    PRJNA571461
    Biosample
    SAMN12815001
    Accession No.
    GCA_027917475.1
    RefSeq Accession No.
    -
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    DOE Joint Genome Institute
    Released Date
    2023-11-18
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA Protein
    RefSeq Download
    -
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_027917475.1 - - Led_CS584_1 Draft genome in scaffold level 2023-01-17 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 37,472,073
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 1,664
    GC content 46
    Scaffold sequence No. 1,664
    Scaffold L50 123
    Scaffold N50 (bp) 83,278
    Scaffold N75 (bp) 36,593
    Scaffold N90 (bp) 10,388
    Contig sequence No. 1,740
    Contig L50 123
    Contig N50 (bp) 83,278
    Unique components No. 1,740
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 76
    Ns gap sequence region length (bp) 6,774
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 13619 256 0 0 3 0 13878