logo
Advanced

  • Pseudomonas savastanoi pv. glycinea
  • ASM370212v1
    • Scientific Name
    Pseudomonas savastanoi pv. glycinea
    Common Names
    Pseudomonas syringae glycinea, Pseudomonas syringae (PV. GLYCINEA)
    Bioproject
    PRJNA292453
    Biosample
    SAMN03976360
    Accession No.
    GCA_003702125.1
    RefSeq Accession No.
    GCF_003702125.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Toronto
    Released Date
    2023-12-26
    NCBI Released Date
    2018-10-30
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_003702125.1 GCF_003702125.1 identical ASM370212v1 Draft genome in chromosome level 2018-10-30 DNA GFF CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 5,937,280
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 1,629
    GC content 58
    Scaffold sequence No. 1,629
    Scaffold L50 257
    Scaffold N50 (bp) 7,006
    Scaffold N75 (bp) 3,581
    Scaffold N90 (bp) 1,782
    Contig sequence No. 1,800
    Contig L50 283
    Contig N50 (bp) 6,466
    Unique components No. 1,629
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 171
    Ns gap sequence region length (bp) 7,472
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 5777 0 0 0 0 0 5777

    Statistics of Genome Assembly

    Genome size (bp) 5,937,280
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 1,629
    GC content 58
    Scaffold sequence No. 1,629
    Scaffold L50 257
    Scaffold N50 (bp) 7,006
    Scaffold N75 (bp) 3,581
    Scaffold N90 (bp) 1,782
    Contig sequence No. 1,800
    Contig L50 283
    Contig N50 (bp) 6,466
    Unique components No. 1,629
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 171
    Ns gap sequence region length (bp) 7,472
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 5349 30 31 832 3 6218