- Scientific Name
- Rhipicephalus microplus
- Common Names
- cattle tick; southern cattle tick; Boophilus microplus, Rhipicephalus (Boophilus) microplus
- Bioproject
- PRJNA1093423
- Biosample
- SAMN40654849
- Accession No.
- GCA_043290135.1
- RefSeq Accession No.
- GCF_043290135.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- USDA
- Released Date
- 2025-08-12
- NCBI Released Date
- 2024-10-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_043290135.1 | GCF_043290135.1 | - | USDA_Rmic | Draft genome in scaffold level | 2024-10-17 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,265,190,508 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 1,203 |
| GC content | 45.5 |
| Scaffold sequence No. | 1,203 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 243,251,516 |
| Scaffold N75 (bp) | 136,578,153 |
| Scaffold N90 (bp) | 10,033,504 |
| Contig sequence No. | 1,580 |
| Contig L50 | 45 |
| Contig N50 (bp) | 19,958,966 |
| Unique components No. | 1,203 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 377 |
| Ns gap sequence region length (bp) | 75,400 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 3,265,175,345 |
| Chromosomes, organellas and plasmids sequnece No. | 11 |
| Genome sequence No. | 1,202 |
| GC content | 45.5 |
| Scaffold sequence No. | 1,202 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 243,251,516 |
| Scaffold N75 (bp) | 136,578,153 |
| Scaffold N90 (bp) | 10,033,504 |
| Contig sequence No. | 1,579 |
| Contig L50 | 45 |
| Contig N50 (bp) | 19,958,966 |
| Unique components No. | 1,202 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 377 |
| Ns gap sequence region length (bp) | 75,400 |
| Gaps No. between scaffolds | 0 |