- Scientific Name
- Manihot esculenta
- Common Names
- manioc, tapioca, yuca; cassava; Manihot utilissima
- Bioproject
- PRJNA1172198
- Biosample
- SAMN44285527
- Accession No.
- GCA_046055835.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DSMZ (Plant Virus Department), TU Braunschweig
- Released Date
- 2025-05-01
- NCBI Released Date
- 2024-12-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_046055835.1 | - | - | col40_hifiasm_v1.hapB | Draft genome in scaffold level | 2024-12-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 693,866,110 |
| Chromosomes, organellas and plasmids sequnece No. | 18 |
| Genome sequence No. | 427 |
| GC content | 38 |
| Scaffold sequence No. | 427 |
| Scaffold L50 | 9 |
| Scaffold N50 (bp) | 36,030,295 |
| Scaffold N75 (bp) | 32,913,063 |
| Scaffold N90 (bp) | 31,687,824 |
| Contig sequence No. | 446 |
| Contig L50 | 10 |
| Contig N50 (bp) | 29,972,817 |
| Unique components No. | 427 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 1,900 |
| Gaps No. between scaffolds | 0 |