- Scientific Name
- Manihot esculenta
- Common Names
- manioc, tapioca, yuca; cassava; Manihot utilissima
- Bioproject
- PRJNA1172196
- Biosample
- SAMN44285527
- Accession No.
- GCA_046055945.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- DSMZ (Plant Virus Department), TU Braunschweig
- Released Date
- 2025-05-01
- NCBI Released Date
- 2024-12-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_046055945.1 | - | - | col40_hifiasm_v1.hapA | Draft genome in scaffold level | 2024-12-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 821,136,820 |
| Chromosomes, organellas and plasmids sequnece No. | 18 |
| Genome sequence No. | 2,541 |
| GC content | 38.5 |
| Scaffold sequence No. | 2,541 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 37,284,664 |
| Scaffold N75 (bp) | 33,260,691 |
| Scaffold N90 (bp) | 58,766 |
| Contig sequence No. | 2,546 |
| Contig L50 | 11 |
| Contig N50 (bp) | 34,836,545 |
| Unique components No. | 2,541 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 500 |
| Gaps No. between scaffolds | 0 |