- Scientific Name
- Oryza rufipogon
- Common Names
- common wild rice, red rice;
- Bioproject
- PRJNA1145174
- Biosample
- SAMN43056443
- Accession No.
- GCA_046718375.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Queensland
- Released Date
- 2025-08-19
- NCBI Released Date
- 2025-01-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_046718375.1 | - | - | Oruf_Collapsed_v1.0 | Draft genome in scaffold level | 2025-01-15 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 410,488,348 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 12 |
| GC content | 44 |
| Scaffold sequence No. | 12 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 33,219,564 |
| Scaffold N75 (bp) | 30,013,374 |
| Scaffold N90 (bp) | 27,974,182 |
| Contig sequence No. | 34 |
| Contig L50 | 8 |
| Contig N50 (bp) | 21,235,413 |
| Unique components No. | 12 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 22 |
| Ns gap sequence region length (bp) | 4,400 |
| Gaps No. between scaffolds | 0 |