- Scientific Name
- Tenacibaculum mesophilum
- Common Names
- -
- Bioproject
- PRJNA493172
- Biosample
- SAMN10130967
- Accession No.
- GCA_003867075.1
- RefSeq Accession No.
- GCF_003867075.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Temasek Life Sciences Laboratory
- Released Date
- 2025-04-30
- NCBI Released Date
- 2018-12-06
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003867075.1 | GCF_003867075.1 | identical | ASM386707v1 | Draft genome in scaffold level | 2018-12-06 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,344,178 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 32 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 3,344,178 |
| Scaffold N75 (bp) | 3,344,178 |
| Scaffold N90 (bp) | 3,344,178 |
| Contig sequence No. | 1 |
| Contig L50 | 1 |
| Contig N50 (bp) | 3,344,078 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1 |
| Ns gap sequence region length (bp) | 100 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2959 | 55 | 15 | 1 | 26 | 3 | 3059 |
Statistics of Genome Assembly
| Genome size (bp) | 3,344,178 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 32 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 3,344,178 |
| Scaffold N75 (bp) | 3,344,178 |
| Scaffold N90 (bp) | 3,344,178 |
| Contig sequence No. | 1 |
| Contig L50 | 1 |
| Contig N50 (bp) | 3,344,078 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1 |
| Ns gap sequence region length (bp) | 100 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2978 | 55 | 15 | asse1 | 12 | 3 | 3064 |