- Scientific Name
- Rhipicephalus microplus
- Common Names
- cattle tick; southern cattle tick; Boophilus microplus, Rhipicephalus (Boophilus) microplus
- Bioproject
- PRJNA312025
- Biosample
- SAMN04492774
- Accession No.
- GCA_002176555.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Centre for Comparative Genomics
- Released Date
- 2023-10-30
- NCBI Released Date
- 2017-06-07
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002176555.1 | - | - | Rmi2.0 | Draft genome in chromosome level | 2017-06-07 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 2,008,371,944 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 195,084 |
| GC content | 45 |
| Scaffold sequence No. | 195,084 |
| Scaffold L50 | 9,003 |
| Scaffold N50 (bp) | 60,268 |
| Scaffold N75 (bp) | 9,983 |
| Scaffold N90 (bp) | 3,231 |
| Contig sequence No. | 280,296 |
| Contig L50 | 31,372 |
| Contig N50 (bp) | 15,568 |
| Unique components No. | 280,296 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 85,212 |
| Ns gap sequence region length (bp) | 61,934,221 |
| Gaps No. between scaffolds | 0 |