- Scientific Name
- Haemaphysalis longicornis
- Common Names
- longhorned tick;
- Bioproject
- PRJNA1172737
- Biosample
- SAMN44280725
- Accession No.
- GCA_048455015.1
- RefSeq Accession No.
- GCF_048455015.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Rutgers, The State University
- Released Date
- 2025-12-19
- NCBI Released Date
- 2025-03-06
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_048455015.1 | GCF_048455015.1 | - | Haemaphysalis longicornis Haplotype H1 | Draft genome in chromosome level | 2025-03-06 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,091,334,561 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 270 |
| GC content | 47.5 |
| Scaffold sequence No. | 270 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 213,415,095 |
| Scaffold N75 (bp) | 156,652,994 |
| Scaffold N90 (bp) | 63,003,047 |
| Contig sequence No. | 6,057 |
| Contig L50 | 601 |
| Contig N50 (bp) | 1,249,399 |
| Unique components No. | 270 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5,787 |
| Ns gap sequence region length (bp) | 502,078 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 3,091,349,279 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 271 |
| GC content | 47.5 |
| Scaffold sequence No. | 271 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 213,415,095 |
| Scaffold N75 (bp) | 156,652,994 |
| Scaffold N90 (bp) | 63,003,047 |
| Contig sequence No. | 6,058 |
| Contig L50 | 601 |
| Contig N50 (bp) | 1,249,399 |
| Unique components No. | 271 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5,787 |
| Ns gap sequence region length (bp) | 502,078 |
| Gaps No. between scaffolds | 0 |