- Scientific Name
- Sporobolus alterniflorus
- Common Names
- salt marsh cordgrass; smooth cordgrass; Spartina alterniflora
- Bioproject
- PRJNA961432
- Biosample
- SAMN34359773
- Accession No.
- GCA_048128665.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Chinese Academy of Agricultural Sciences
- Released Date
- 2025-05-08
- NCBI Released Date
- 2025-02-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_048128665.1 | - | - | ASM4812866v1 | Draft genome in scaffold level | 2025-02-28 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 1,698,702,275 |
| Chromosomes, organellas and plasmids sequnece No. | 31 |
| Genome sequence No. | 45 |
| GC content | 45 |
| Scaffold sequence No. | 45 |
| Scaffold L50 | 13 |
| Scaffold N50 (bp) | 61,698,761 |
| Scaffold N75 (bp) | 45,313,027 |
| Scaffold N90 (bp) | 39,652,486 |
| Contig sequence No. | 55 |
| Contig L50 | 14 |
| Contig N50 (bp) | 49,012,605 |
| Unique components No. | 45 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 10 |
| Ns gap sequence region length (bp) | 5,000 |
| Gaps No. between scaffolds | 0 |