- Scientific Name
- Setaria italica
- Common Names
- foxtail millet; Chaetochloa italica, Panicum italicum, Pennisetum macrochaetum, Setaria viridis subsp. italica
- Bioproject
- PRJNA1139385
- Biosample
- SAMN42772329
- Accession No.
- GCA_048537675.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- China Agricultural University
- Released Date
- 2025-05-08
- NCBI Released Date
- 2025-03-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_048537675.1 | - | - | ASM4853767v1 | Draft genome in scaffold level | 2025-03-10 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 426,307,473 |
| Chromosomes, organellas and plasmids sequnece No. | 9 |
| Genome sequence No. | 133 |
| GC content | 46.5 |
| Scaffold sequence No. | 133 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 43,805,500 |
| Scaffold N75 (bp) | 41,168,000 |
| Scaffold N90 (bp) | 36,933,134 |
| Contig sequence No. | 201 |
| Contig L50 | 10 |
| Contig N50 (bp) | 16,027,446 |
| Unique components No. | 133 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 68 |
| Ns gap sequence region length (bp) | 34,000 |
| Gaps No. between scaffolds | 0 |