- Scientific Name
- Sphingomonadales bacterium
- Common Names
- -
- Bioproject
- PRJNA272922
- Biosample
- SAMN10678695
- Accession No.
- GCA_004144105.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of East Anglia
- Released Date
- 2023-12-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 2,976,619 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,039 |
| GC content | 64.5 |
| Scaffold sequence No. | 1,039 |
| Scaffold L50 | 223 |
| Scaffold N50 (bp) | 3,733 |
| Scaffold N75 (bp) | 1,978 |
| Scaffold N90 (bp) | 1,297 |
| Contig sequence No. | 1,042 |
| Contig L50 | 224 |
| Contig N50 (bp) | 3,713 |
| Unique components No. | 1,039 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 85 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3314 | 36 | 2 | 0 | 68 | 2 | 3422 |