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  • Rhipicephalus microplus
  • BIME_Rmic_1.3
    • Scientific Name
    Rhipicephalus microplus
    Common Names
    cattle tick; southern cattle tick; Boophilus microplus, Rhipicephalus (Boophilus) microplus
    Bioproject
    PRJNA633311
    Biosample
    SAMN14941061
    Accession No.
    GCA_013339725.1
    RefSeq Accession No.
    GCF_013339725.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    TIGMIC Group
    Released Date
    2025-02-23
    NCBI Released Date
    2020-06-16
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_013339725.1 GCF_013339725.1 different BIME_Rmic_1.3 Draft genome in scaffold level 2020-06-16 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,529,930,717
    Chromosomes, organellas and plasmids sequnece No. 12
    Genome sequence No. 7,048
    GC content 46
    Scaffold sequence No. 7,048
    Scaffold L50 6
    Scaffold N50 (bp) 183,350,851
    Scaffold N75 (bp) 139,434,689
    Scaffold N90 (bp) 99,216
    Contig sequence No. 8,624
    Contig L50 334
    Contig N50 (bp) 1,791,079
    Unique components No. 7,048
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1,576
    Ns gap sequence region length (bp) 158,004
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 29866 0 0 0 4 0 29870

    Statistics of Genome Assembly

    Genome size (bp) 2,529,930,304
    Chromosomes, organellas and plasmids sequnece No. 12
    Genome sequence No. 7,048
    GC content 46
    Scaffold sequence No. 7,048
    Scaffold L50 6
    Scaffold N50 (bp) 183,350,851
    Scaffold N75 (bp) 139,434,689
    Scaffold N90 (bp) 99,216
    Contig sequence No. 8,624
    Contig L50 334
    Contig N50 (bp) 1,791,079
    Unique components No. 7,048
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1,576
    Ns gap sequence region length (bp) 158,004
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 18598 6131 473083 1114 0 28973