- Scientific Name
- Rhipicephalus microplus
- Common Names
- cattle tick; southern cattle tick; Boophilus microplus, Rhipicephalus (Boophilus) microplus
- Bioproject
- PRJNA552342
- Biosample
- SAMN06075429
- Accession No.
- GCA_013435995.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Texas A&M University
- Released Date
- 2023-12-03
- NCBI Released Date
- 2020-07-21
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_013435995.1 | - | - | ASM1343599v1 | Draft genome in chromosome level | 2020-07-21 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 3,631,904,383 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 29,076 |
| GC content | 45.5 |
| Scaffold sequence No. | 29,076 |
| Scaffold L50 | 802 |
| Scaffold N50 (bp) | 1,184,201 |
| Scaffold N75 (bp) | 453,244 |
| Scaffold N90 (bp) | 46,172 |
| Contig sequence No. | 93,737 |
| Contig L50 | 12,727 |
| Contig N50 (bp) | 64,461 |
| Unique components No. | 29,076 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 64,661 |
| Ns gap sequence region length (bp) | 6,466,100 |
| Gaps No. between scaffolds | 0 |