- Scientific Name
- Salmonella enterica subsp. enterica
- Common Names
- Salmonella cholerae-suis subsp. cholerae-suis, Salmonella choleraesuis subsp. choleraesuis, Salmonella enterica I, Salmonella enterica subsp. I, Salmonella enterica subsp. Subsp. I, Salmonella enterica subsp. Subsp. Ixxx
- Bioproject
- PRJNA186035
- Biosample
- SAMN03464588
- Accession No.
- GCA_003872565.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Center for Food Safety and Applied Nutrition
- Released Date
- 2026-04-30
- NCBI Released Date
- 2018-12-06
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003872565.2 | GCF_003872565.1 | identical | ASM387256v2 | Draft genome in contig level | 2021-06-07 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
| GCA_003872565.1 | - | - | PDT000065070.2 | Complete genome | 2018-12-06 | DNA GFF RNA CDS Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,982,626 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| Contig sequence No. | 58 |
| Contig L50 | 6 |
| Contig N50 (bp) | 371,348 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4642 | 75 | 12 | 7 | 277 | 3 | 5016 |