logo
Advanced

  • Rhipicephalus sanguineus
  • ASM1333969v1
    • Scientific Name
    Rhipicephalus sanguineus
    Common Names
    brown dog tick; Ixodes sanguineus
    Bioproject
    PRJNA633311
    Biosample
    SAMN14941062
    Accession No.
    GCA_013339695.1
    RefSeq Accession No.
    GCF_013339695.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    TIGMIC Group
    Released Date
    2025-05-21
    NCBI Released Date
    2020-06-16
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_013339695.2 GCF_013339695.2 different BIME_Rsan_1.4 Draft genome in scaffold level 2022-06-24 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_013339695.1 GCF_013339695.1 different ASM1333969v1 Draft genome in scaffold level 2020-06-16 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,365,540,023
    Chromosomes, organellas and plasmids sequnece No. 12
    Genome sequence No. 2,329
    GC content 47
    Scaffold sequence No. 2,329
    Scaffold L50 5
    Scaffold N50 (bp) 208,696,187
    Scaffold N75 (bp) 154,776,919
    Scaffold N90 (bp) 145,390,364
    Contig sequence No. 12,688
    Contig L50 1,115
    Contig N50 (bp) 541,946
    Unique components No. 2,329
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 10,359
    Ns gap sequence region length (bp) 1,036,102
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 25718 0 0 0 10 0 25728

    Statistics of Genome Assembly

    Genome size (bp) 2,365,540,030
    Chromosomes, organellas and plasmids sequnece No. 12
    Genome sequence No. 2,329
    GC content 47
    Scaffold sequence No. 2,329
    Scaffold L50 5
    Scaffold N50 (bp) 208,696,187
    Scaffold N75 (bp) 154,776,919
    Scaffold N90 (bp) 145,390,364
    Contig sequence No. 12,688
    Contig L50 1,115
    Contig N50 (bp) 541,946
    Unique components No. 2,329
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 10,359
    Ns gap sequence region length (bp) 1,036,102
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 23522 4816 1575842 1390 0 35727