- Scientific Name
- Helianthus annuus
- Common Names
- common sunflower;
- Bioproject
- PRJNA345532
- Biosample
- SAMN05868438
- Accession No.
- GCA_002127325.1
- RefSeq Accession No.
- GCF_002127325.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- International Consortium for Sunflower Genomics
- Released Date
- 2025-05-21
- NCBI Released Date
- 2017-05-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002127325.2 | GCF_002127325.2 | different | HanXRQr2.0-SUNRISE | Draft genome in scaffold level | 2020-07-15 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
| GCA_002127325.1 | GCF_002127325.1 | different | HanXRQr1.0 | Draft genome in scaffold level | 2017-05-12 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,027,844,945 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 1,528 |
| GC content | 38.5 |
| Scaffold sequence No. | 1,528 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 178,899,001 |
| Scaffold N75 (bp) | 168,460,249 |
| Scaffold N90 (bp) | 153,252,196 |
| Contig sequence No. | 13,954 |
| Contig L50 | 2,082 |
| Contig N50 (bp) | 414,085 |
| Unique components No. | 13,954 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 12,426 |
| Ns gap sequence region length (bp) | 102,549,242 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 52191 | 832 | 101 | 4657 | 51 | 0 | 57832 |
Statistics of Genome Assembly
| Genome size (bp) | 3,027,844,889 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 1,528 |
| GC content | 38.5 |
| Scaffold sequence No. | 1,528 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 178,899,001 |
| Scaffold N75 (bp) | 168,460,249 |
| Scaffold N90 (bp) | 153,252,196 |
| Contig sequence No. | 13,954 |
| Contig L50 | 2,082 |
| Contig N50 (bp) | 414,085 |
| Unique components No. | 13,954 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 12,426 |
| Ns gap sequence region length (bp) | 102,549,242 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 58340 | 1279 | 11 | asse19573 | 2475 | 0 | 81678 |