Scientific Name
Vigna unguiculata
Common Names
cowpea; Phaseolus unguiculatus
Bioproject
PRJNA381312
Biosample
SAMN06674009
Accession No.
GCA_004118075.1
RefSeq Accession No.
GCF_004118075.1
RefSeq vs GenBank similarity
different
Source
NCBI
External Links
NCBI
Submitter Organization
University of California, Riverside
Released Date
2025-05-21
NCBI Released Date
2019-01-30
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Download
DNA
RefSeq Download
RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)
-
Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
GCA_004118075.2 GCF_004118075.2 different ASM411807v2 Draft genome in scaffold level 2019-01-30 DNA
RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_004118075.1 GCF_004118075.1 different ASM411807v1 Draft genome in scaffold level 2019-01-30 DNA
RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

Statistics of Genome Assembly

Genome size (bp) 518,914,349
Chromosomes, organellas and plasmids sequnece No. 11
Genome sequence No. 681
GC content 33
Scaffold sequence No. 681
Scaffold L50 6
Scaffold N50 (bp) 41,684,185
Scaffold N75 (bp) 38,363,498
Scaffold N90 (bp) 33,908,088
Contig sequence No. 749
Contig L50 16
Contig N50 (bp) 10,911,736
Unique components No. 681
No. of regions with alternate loci or patches 0
Ns gap sequence No. (bp) 68
Ns gap sequence region length (bp) 2,720,798
Gaps No. between scaffolds 0

Statistics of Genome Assembly

Genome size (bp) 519,066,764
Chromosomes, organellas and plasmids sequnece No. 12
Genome sequence No. 682
GC content 33
Scaffold sequence No. 682
Scaffold L50 6
Scaffold N50 (bp) 41,684,185
Scaffold N75 (bp) 38,363,498
Scaffold N90 (bp) 33,908,088
Contig sequence No. 750
Contig L50 16
Contig N50 (bp) 10,911,736
Unique components No. 682
No. of regions with alternate loci or patches 0
Ns gap sequence No. (bp) 68
Ns gap sequence region length (bp) 2,720,798
Gaps No. between scaffolds 0
Annotation of Whole Genome Assembly
asse
Protein trna rrna ncrna Pseudogene Others Total
Total 28314 1135 12862434 1214 0 34383