- Scientific Name
- Sporobolus alterniflorus
- Common Names
- salt marsh cordgrass; smooth cordgrass; Spartina alterniflora
- Bioproject
- PRJNA479677
- Biosample
- SAMN09601648
- Accession No.
- GCA_008808055.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- IRIDIAN GENOMES
- Released Date
- 2025-05-21
- NCBI Released Date
- 2020-03-31
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_008808055.3 | - | - | ASM880805v3 | Draft genome in chromosome level | 2023-02-09 | DNA |
| GCA_008808055.2 | - | - | ASM880805v2 | Draft genome in chromosome level | 2020-03-31 | DNA |
| GCA_008808055.1 | - | - | ASM880805v1 | Complete genome | 2019-10-03 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 1,525,935,245 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 715,211 |
| GC content | 45 |
| Scaffold sequence No. | 715,211 |
| Scaffold L50 | 13 |
| Scaffold N50 (bp) | 992,719 |
| Scaffold N75 (bp) | 1,271 |
| Scaffold N90 (bp) | 588 |
| Contig sequence No. | 721,442 |
| Contig L50 | 2,712 |
| Contig N50 (bp) | 16,854 |
| Unique components No. | 715,211 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6,231 |
| Ns gap sequence region length (bp) | 4,604,499 |
| Gaps No. between scaffolds | 0 |