- Scientific Name
- Ixodes persulcatus
- Common Names
- taiga tick;
- Bioproject
- PRJNA633311
- Biosample
- SAMN14941057
- Accession No.
- GCA_013358835.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- TIGMIC Group
- Released Date
- 2024-01-20
- NCBI Released Date
- 2020-06-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_013358835.2 | - | - | BIME_Iper_1.3 | Draft genome in chromosome level | 2020-06-23 | DNA GFF RNA CDS Protein |
| GCA_013358835.1 | - | - | BMI_IPER_1.0 | Draft genome in chromosome level | 2020-06-23 | DNA GFF RNA CDS Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,899,977,048 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 11,597 |
| GC content | 46 |
| Scaffold sequence No. | 11,597 |
| Scaffold L50 | 936 |
| Scaffold N50 (bp) | 532,020 |
| Scaffold N75 (bp) | 209,258 |
| Scaffold N90 (bp) | 51,823 |
| Contig sequence No. | 11,611 |
| Contig L50 | 936 |
| Contig N50 (bp) | 532,020 |
| Unique components No. | 11,597 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 14 |
| Ns gap sequence region length (bp) | 1,758 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 28396 | 0 | 0 | 0 | 114 | 0 | 28510 |