- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJNA144099
- Biosample
- SAMN02953814
- Accession No.
- GCA_000325925.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- BGI-shenzhen
- Released Date
- 2023-11-20
- NCBI Released Date
- 2015-03-18
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000325925.2 | - | - | minipig_v1.0 | Draft genome in chromosome level | 2015-03-18 | DNA |
| GCA_000325925.1 | - | - | minipig_v1.0 | Complete genome | 2012-11-30 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 2,508,912,457 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 137,577 |
| Scaffold sequence No. | 137,577 |
| Scaffold L50 | 132 |
| Scaffold N50 (bp) | 5,853,977 |
| Scaffold N75 (bp) | 2,266,534 |
| Scaffold N90 (bp) | 816,901 |
| Contig sequence No. | 272,163 |
| Contig L50 | 22,566 |
| Contig N50 (bp) | 31,939 |
| Unique components No. | 272,163 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 134,586 |
| Ns gap sequence region length (bp) | 55,427,968 |
| Gaps No. between scaffolds | 0 |