- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJNA309108
- Biosample
- SAMN04440474
- Accession No.
- GCA_001700165.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Novogene
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-08-05
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001700165.1 | - | - | Hampshire_pig_v1 | Draft genome in chromosome level | 2016-08-05 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 2,437,109,612 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 82,206 |
| Scaffold sequence No. | 82,206 |
| Scaffold L50 | 440 |
| Scaffold N50 (bp) | 1,550,023 |
| Scaffold N75 (bp) | 772,242 |
| Scaffold N90 (bp) | 314,831 |
| Contig sequence No. | 122,452 |
| Contig L50 | 7,042 |
| Contig N50 (bp) | 102,417 |
| Unique components No. | 82,206 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 40,246 |
| Ns gap sequence region length (bp) | 19,098,184 |
| Gaps No. between scaffolds | 0 |