- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJNA186497
- Biosample
- SAMN01894235
- Accession No.
- GCA_000472085.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Novogene
- Released Date
- 2023-11-07
- NCBI Released Date
- 2016-08-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000472085.2 | - | - | Tibetan_Pig_v2 | Draft genome in chromosome level | 2016-08-08 | DNA |
| GCA_000472085.1 | - | - | Tibetan_Pig_v1.0 | Draft genome in chromosome level | 2015-02-06 | DNA GFF |
Statistics of Genome Assembly
| Genome size (bp) | 2,437,742,524 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 72,068 |
| Scaffold sequence No. | 72,068 |
| Scaffold L50 | 839 |
| Scaffold N50 (bp) | 861,885 |
| Scaffold N75 (bp) | 431,227 |
| Scaffold N90 (bp) | 194,444 |
| Contig sequence No. | 148,234 |
| Contig L50 | 11,378 |
| Contig N50 (bp) | 57,199 |
| Unique components No. | 72,068 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 76,166 |
| Ns gap sequence region length (bp) | 57,864,158 |
| Gaps No. between scaffolds | 0 |