Genome Warehouse

Scientific Name: Homo sapiens
Common Names: human;
Bioproject: PRJNA31257
Accession No.: GCA_000001405.29
RefSeq Accession No.: GCF_000001405.40
RefSeq vs GenBank similarity: different
Source: NCBI
External Links: NCBI
Submitter Organization: Genome Reference Consortium
Released Date: 2024-10-02
NCBI Released Date: 2022-02-03
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Download: DNA GFF RNA CDS Protein
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)

History

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	NCBI Released Date	Download Files
GCA_000001405.29	GCF_000001405.40	different	GRCh38.p14	Draft genome in scaffold level	2022-02-03	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.28	GCF_000001405.39	different	GRCh38.p13	Draft genome in scaffold level	2019-02-28	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.27	GCF_000001405.38	different	GRCh38.p12	Draft genome in scaffold level	2017-12-21	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.26	GCF_000001405.37	identical	GRCh38.p11	Draft genome in scaffold level	2017-06-14	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.25	GCF_000001405.36	identical	GRCh38.p10	Draft genome in scaffold level	2017-01-06	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.24	GCF_000001405.35	identical	GRCh38.p9	Draft genome in scaffold level	2016-09-26	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.23	GCF_000001405.34	identical	GRCh38.p8	Draft genome in scaffold level	2016-06-30	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.22	GCF_000001405.33	identical	GRCh38.p7	Draft genome in scaffold level	2016-03-21	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.21	GCF_000001405.32	identical	GRCh38.p6	Draft genome in scaffold level	2015-12-21	DNA GFF Protein RefSeq DNA RefSeq GFF RefSeq Protein
GCA_000001405.20	GCF_000001405.31	identical	GRCh38.p5	Draft genome in scaffold level	2015-09-22	DNA GFF Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.19	GCF_000001405.30	identical	GRCh38.p4	Draft genome in scaffold level	2015-06-25	DNA GFF Protein RefSeq DNA RefSeq GFF RefSeq Protein
GCA_000001405.18	GCF_000001405.29	identical	GRCh38.p3	Draft genome in scaffold level	2015-04-03	DNA GFF Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
GCA_000001405.16	GCF_000001405.27	identical	GRCh38.p1	Draft genome in scaffold level	2014-10-03	DNA GFF Protein RefSeq DNA RefSeq GFF RefSeq Protein
GCA_000001405.14	GCF_000001405.25	identical	GRCh37.p13	Draft genome in scaffold level	2013-06-28	DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

GenBank
RefSeq

Statistics of Genome Assembly

Genome size (bp)	3,298,912,062
Chromosomes, organellas and plasmids sequnece No.	25
Genome sequence No.	709
GC content	41
Scaffold sequence No.	989
Scaffold L50	17
Scaffold N50 (bp)	59,364,414
Scaffold N75 (bp)	31,366,742
Scaffold N90 (bp)	5,500,449
Contig sequence No.	1,652
Contig L50	20
Contig N50 (bp)	54,806,562
Unique components No.	36,829
No. of regions with alternate loci or patches	434
Ns gap sequence No. (bp)	663
Ns gap sequence region length (bp)	161,611,139
Gaps No. between scaffolds	349

Annotation of Whole Genome Assembly

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	13	22	2	0	0	0	37

Statistics of Genome Assembly

Genome size (bp)	3,298,430,636
Chromosomes, organellas and plasmids sequnece No.	25
Genome sequence No.	705
GC content	41
Scaffold sequence No.	985
Scaffold L50	17
Scaffold N50 (bp)	59,364,414
Scaffold N75 (bp)	31,366,742
Scaffold N90 (bp)	5,500,449
Contig sequence No.	1,648
Contig L50	20
Contig N50 (bp)	54,806,562
Unique components No.	36,825
No. of regions with alternate loci or patches	434
Ns gap sequence No. (bp)	663
Ns gap sequence region length (bp)	161,611,139
Gaps No. between scaffolds	349