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  • Ailuropoda melanoleuca
  • ASM200744v3
    • Scientific Name
    Ailuropoda melanoleuca
    Common Names
    giant panda;
    Bioproject
    PRJNA588422
    Biosample
    SAMN04193337
    Accession No.
    GCA_002007445.3
    RefSeq Accession No.
    GCF_002007445.2
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Institute of Zoology, Chinese Academy of Sciences
    Released Date
    2023-11-21
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_002007445.3 GCF_002007445.2 different ASM200744v3 Draft genome in chromosome level 2020-04-20 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,440,260,518
    Chromosomes, organellas and plasmids sequnece No. 21
    Genome sequence No. 73,513
    GC content 41.5
    Scaffold sequence No. 73,513
    Scaffold L50 8
    Scaffold N50 (bp) 129,245,720
    Scaffold N75 (bp) 92,459,488
    Scaffold N90 (bp) 38,124,791
    Contig sequence No. 122,819
    Contig L50 5,332
    Contig N50 (bp) 127,687
    Unique components No. 73,513
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 49,306
    Ns gap sequence region length (bp) 46,690,237
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,440,277,323
    Chromosomes, organellas and plasmids sequnece No. 22
    Genome sequence No. 73,514
    GC content 41.5
    Scaffold sequence No. 73,514
    Scaffold L50 8
    Scaffold N50 (bp) 129,245,720
    Scaffold N75 (bp) 92,459,488
    Scaffold N90 (bp) 38,124,791
    Contig sequence No. 122,820
    Contig L50 5,332
    Contig N50 (bp) 127,687
    Unique components No. 73,514
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 49,306
    Ns gap sequence region length (bp) 46,690,237
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 20838 485 146252 3591 156 31336