logo
Advanced

  • Microtus fortis
  • M_Fortis_MF-2015_v1.1
    • Scientific Name
    Microtus fortis
    Common Names
    reed vole; Alexandromys fortis
    Bioproject
    PRJNA391843
    Biosample
    SAMN07276871
    Accession No.
    GCA_014885135.2
    RefSeq Accession No.
    GCF_014885135.2
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Shanghai Institute for Biological Sciences, Chinese Academy of Sciences
    Released Date
    2024-09-22
    NCBI Released Date
    2020-10-13
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_014885135.2 GCF_014885135.2 identical M_Fortis_MF-2015_v1.1 Draft genome in chromosome level 2020-10-13 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_014885135.1 - - M_Fortis_MF-2015_v1 Draft genome in chromosome level 2020-10-13 DNA

    Statistics of Genome Assembly

    Genome size (bp) 2,189,376,753
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 10,460
    GC content 42.5
    Scaffold sequence No. 10,460
    Scaffold L50 65
    Scaffold N50 (bp) 9,992,017
    Scaffold N75 (bp) 4,517,772
    Scaffold N90 (bp) 1,779,544
    Contig sequence No. 59,935
    Contig L50 6,515
    Contig N50 (bp) 90,683
    Unique components No. 10,460
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 49,475
    Ns gap sequence region length (bp) 96,413,350
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,189,376,753
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 10,460
    GC content 42.5
    Scaffold sequence No. 10,460
    Scaffold L50 65
    Scaffold N50 (bp) 9,992,017
    Scaffold N75 (bp) 4,517,772
    Scaffold N90 (bp) 1,779,544
    Contig sequence No. 59,935
    Contig L50 6,515
    Contig N50 (bp) 90,683
    Unique components No. 10,460
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 49,475
    Ns gap sequence region length (bp) 96,413,350
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 21656 412 184542 2816 257 29701