- Scientific Name
- Kogia breviceps
- Common Names
- pygmy sperm whale; Physeter breviceps
- Bioproject
- PRJNA901930
- Biosample
- SAMN31719513
- Accession No.
- GCA_026419965.1
- RefSeq Accession No.
- GCF_026419965.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Vertebrate Genomes Project
- Released Date
- 2025-02-23
- NCBI Released Date
- 2022-11-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_026419965.1 | GCF_026419965.1 | - | mKogBre1 haplotype 1 | Draft genome in scaffold level | 2022-11-27 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,555,838,840 |
| Chromosomes, organellas and plasmids sequnece No. | 21 |
| Genome sequence No. | 580 |
| GC content | 42 |
| Scaffold sequence No. | 580 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 122,394,096 |
| Scaffold N75 (bp) | 91,728,547 |
| Scaffold N90 (bp) | 78,202,441 |
| Contig sequence No. | 723 |
| Contig L50 | 20 |
| Contig N50 (bp) | 42,780,423 |
| Unique components No. | 580 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 143 |
| Ns gap sequence region length (bp) | 4,797,769 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 2,555,855,246 |
| Chromosomes, organellas and plasmids sequnece No. | 22 |
| Genome sequence No. | 581 |
| GC content | 42 |
| Scaffold sequence No. | 581 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 122,394,096 |
| Scaffold N75 (bp) | 91,728,547 |
| Scaffold N90 (bp) | 78,202,441 |
| Contig sequence No. | 724 |
| Contig L50 | 20 |
| Contig N50 (bp) | 42,780,423 |
| Unique components No. | 581 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 143 |
| Ns gap sequence region length (bp) | 4,797,769 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 18980 | 1003 | 573 | asse3971 | 3490 | 38 | 28055 |