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  • Hipposideros armiger
  • ASM189008v1
    • Scientific Name
    Hipposideros armiger
    Common Names
    great Himalayan leaf-nosed bat, great leaf-nosed bat; great roundleaf bat; Rhinolophus armiger
    Bioproject
    PRJNA267039
    Biosample
    SAMN03177460
    Accession No.
    GCA_001890085.1
    RefSeq Accession No.
    GCF_001890085.2
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    SKLEC & IECR
    Released Date
    2024-09-27
    NCBI Released Date
    2016-12-06
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_001890085.1 GCF_001890085.1 different ASM189008v1 Draft genome in chromosome level 2016-12-06 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_001890085.1 GCF_001890085.2 different ASM189008v1 Draft genome in chromosome level 2016-12-06 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,236,564,388
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 7,570
    GC content 41
    Scaffold sequence No. 7,570
    Scaffold L50 272
    Scaffold N50 (bp) 2,328,177
    Scaffold N75 (bp) 1,089,763
    Scaffold N90 (bp) 490,461
    Contig sequence No. 128,955
    Contig L50 13,917
    Contig N50 (bp) 39,863
    Unique components No. 7,570
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 121,385
    Ns gap sequence region length (bp) 281,733,723
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 2,236,326,314
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 7,387
    GC content 41
    Scaffold sequence No. 7,387
    Scaffold L50 272
    Scaffold N50 (bp) 2,328,177
    Scaffold N75 (bp) 1,089,763
    Scaffold N90 (bp) 490,667
    Contig sequence No. 128,771
    Contig L50 13,913
    Contig N50 (bp) 39,867
    Unique components No. 7,387
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 121,384
    Ns gap sequence region length (bp) 281,733,598
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 18920 430 22532 3796 134 25814